Chinese Journal of Catalysis ›› 2012, Vol. 33 ›› Issue (10): 1717-1723.DOI: 10.3724/SP.J.1088.2012.20606

• Research papers • Previous Articles     Next Articles

Probing the Essential Catalytic Residues and Substrate Affinity in Thermophilic L-Arabinose Isomerase by Homology Modeling and Site-Directed Mutagenesis

LI Guixiang, XU Zheng, LI Sha, XU Hong*   

  1. State Key Laboratory of Materials-Oriented Chemical Engineering, College of Food Science and Light Industry, Nanjing University of Technology, Nanjing 210009, Jiangsu China
  • Received:2012-06-06 Revised:2012-07-26 Online:2012-09-28 Published:2012-09-28

Abstract: The L-arabinose isomerase from Lactobacillus fermentum CGMCC2921 (named LFAI) was distinguished from other L-AIs by its outstanding thermostability, and was defined as a potential candidate for industrial D-tagatose production. By means of homologous modeling and structure analysis, some important amino acid residues influencing D-galactose isomerization of LFAI were selected and mutated. The results showed that when residues Q16, M311, K423, and Q438 mutated to alanine, the Km value of the mutant LFAI decreased. Among them, mutant enzyme M311A retained half of its original Km value, and the conversion rate for D-galactose raised approximately 20%. Furthermore, by comparing mutants K423R, K423N, K423A, and native LFAI, it was found that the side-chain length of residue K423 may determine the substrate affinity and D-galactose conversion rate of these mutated enzymes. Through computer molecular modeling, it was also found mutation M311A had an enhancement on hydrogen bonding with D-galactose, thus resulting in an enhancement on its substrate affinity and enzyme activity.

Key words: L-arabinose isomerase, D-tagatose, Lactobacillus fermentum, homology modeling, site-directed mutagenesis